The goal of denguedatahub is to provide the research
community with a unified dataset by collecting worldwide dengue-related
data, merged with exogenous variables helpful for a better understanding
of the spread of dengue and the reproducibility of research.
Check out the website at https://denguedatahub.netlify.app/
You can install the development version of denguedatahub from GitHub with:
install.packages("denguedatahub")# install.packages("devtools")
devtools::install_github("thiyangt/denguedatahub")This is a basic example which shows you how to solve a common problem:
library(tsibble)
#>
#> Attaching package: 'tsibble'
#> The following objects are masked from 'package:base':
#>
#> intersect, setdiff, unionlibrary(denguedatahub)
head(level_of_risk)
#> # A tibble: 6 × 3
#> country level_of_risk region
#> <fct> <fct> <fct>
#> 1 Angola Sporadic/Uncertain Africa
#> 2 Benin Sporadic/Uncertain Africa
#> 3 Burkina Faso Frequent/Continuous Africa
#> 4 Burundi Sporadic/Uncertain Africa
#> 5 Cameroon Sporadic/Uncertain Africa
#> 6 Cape Verde Sporadic/Uncertain Africahead(srilanka_weekly_data)
#> # A tibble: 6 × 6
#> year week start.date end.date district cases
#> <dbl> <dbl> <date> <date> <chr> <dbl>
#> 1 2006 52 2006-12-23 2006-12-29 Colombo 71
#> 2 2006 52 2006-12-23 2006-12-29 Gampaha 12
#> 3 2006 52 2006-12-23 2006-12-29 Kalutara 12
#> 4 2006 52 2006-12-23 2006-12-29 Kandy 20
#> 5 2006 52 2006-12-23 2006-12-29 Matale 4
#> 6 2006 52 2006-12-23 2006-12-29 NuwaraEliya 1library(tidyverse)
world_annual |>
filter(region=="Afghanistan") |>
head()
#> long lat group order region subregion code year incidence
#> 1 74.89131 37.23164 2 12 Afghanistan <NA> AFG 1990 23371
#> 2 74.89131 37.23164 2 12 Afghanistan <NA> AFG 1991 25794
#> 3 74.89131 37.23164 2 12 Afghanistan <NA> AFG 1992 29766
#> 4 74.89131 37.23164 2 12 Afghanistan <NA> AFG 1993 32711
#> 5 74.89131 37.23164 2 12 Afghanistan <NA> AFG 1994 34268
#> 6 74.89131 37.23164 2 12 Afghanistan <NA> AFG 1995 35823
#> dengue.present
#> 1 yes
#> 2 yes
#> 3 yes
#> 4 yes
#> 5 yes
#> 6 yes