Package: dssp
# BOOST1.68 PINNED
#   FTBFS (newer upstream probably okay)
Version: 2.2.1
Revision: 4
Description: Assigns secondary structure based on PDBs
DescDetail: <<
DSSP was designed by Wolfgang Kabsch and Chris Sander to standardize
secondary structure assignment.  The current version was re-written
by Maarten Hekkelman in 2011.

If you use DSSP, please quote:

A series of PDB related databases for everyday needs.
Joosten RP, Te Beek TAH, Krieger E, Hekkelman ML,
Hooft RWW, Schneider R, Sander C, Vriend G,
NAR 2010; doi: 10.1093/nar/gkq1105. (PDF).

Dictionary of protein secondary structure: pattern recognition of
hydrogen-bonded and geometrical features.  Kabsch W, Sander C,
Biopolymers. 1983 22 2577-2637. PMID: 6667333; UI: 84128824. 
<<
License: BSD
HomePage: https://swift.cmbi.umcn.nl/gv/dssp
Maintainer: David M. Rogers <dmroge@sandia.gov>

Source: ftp://ftp.cmbi.ru.nl/pub/software/dssp/%n-%v.tgz
Source-Checksum: SHA256(5fb5e7c085de16c05981e3a72869c8b082911a0b46e6dcc6dbd669c9f267e8e1)

Depends: <<
	boost1.68-nopython-shlibs,
	bzip2-shlibs (>= 1.0)
<<
BuildDepends: <<
	boost1.68-nopython,
	boost1.68-python310,
	fink-package-precedence,
	bzip2-dev
<<

GCC: 4.0

# dmacks: Fix for newer boost
PatchFile: %n.patch
PatchFile-MD5: 21b44e604a3641648609cc668e445cb3
PatchScript: <<
	%{default_script}
	sed -i.old -e s/-static// makefile
	sed -i.old -e 's|man/man1|share/man/man1|' makefile
	perl -pi -e 's/^\t\@/\t/' makefile
<<

SetCFLAGS: -MD
CompileScript: <<
	#!/bin/sh -ev

        echo "BOOST_LIB_SUFFIX = -mt-1_68" >make.config
        echo "BOOST_LIB_DIR    = %p/opt/boost-1_68/lib %p/lib" >>make.config
        echo "BOOST_INC_DIR    = %p/opt/boost-1_68/include %p/include" >>make.config
	DEST_DIR=%p make
	fink-package-precedence --depfile-ext='\.d' .
<<

InstallScript: <<
	#!/bin/sh -ev
	DEST_DIR=%i make install
<<
DocFiles: changelog LICENSE_1_0.txt README.txt